Anchorpoints

Gene id
AT4G02020
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G02580Encodes a putative transcription factor MEDEA (MEA) that negatively regulates seed development in the absence of fertilization. Mutations in this locus result in embryo lethality. MEA is a Polycomb group gene that is imprinted in the endosperm. The maternal allele is expressed and the paternal allele is silent. MEA is controlled by DEMETER (DME), a DNA glycosylase required to activate MEA expression, and METHYLTRANSFERASE I (MET1), which maintains CG methylation at the MEA locus. MEA is involved in the negative regulation of its own imprinted gene expression; the effect is not only allele-specific but also dynamically regulated during seed development. In the ovule, the MEA transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization MEDEA (MEA); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain-containing protein (TAIR:AT4G02020.1); Has 4870 Blast hits to 4762 proteins in 465 species: Archae - 0; Bacteria - 401; Metazoa - 1924; Fungi - 484; Plants - 1009; Viruses - 0; Other Eukaryotes - 1052 (source: NCBI BLink). SET domain-containing protein1+View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G64460No description available.Bd1+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00018G00450No description available.supercontig_18-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA01G25820CC_gene:ezh2,CC_gene:MEA,CC_gene:CLF,CC_gene:EZ1,CC_gene:EZA1,CC_gene:EZ2,CC_gene:EZ3,CC_functional_completeness:complete,PRODUCT:Histone-lysine N-methyltransferase EZ3,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:2.1.1.43chr1-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G19480SET domain containing protein, expressed3-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G18240No description available.Chr03-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G19570No description available.Chr02+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G037450No description available.chr_1+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G44210No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G079390Histone-lysine N-methyltransferase MEDEA (AHRD V1 *--- MEDEA_ARATH)%3B contains Interpro domain(s) IPR001214 SETch01+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G09300name=GSVIVG01028124001;chr7-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G13390Histone-lysine N-methyltransferase EZ3 (EC 2.1.1.43)(Enhancer of zeste protein 3) Histone-lysine N-methyltransferase EZ31-View
ZM09G22380Histone-lysine N-methyltransferase EZ2 (EC 2.1.1.43)(Enhancer of zeste protein 2) Histone-lysine N-methyltransferase EZ29+View


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Gene id
Species
Description
Chromosome
Strand