Anchorpoints

Gene id
AT4G01060
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G01380ENHANCER OF TRY AND CPC 1 (ETC1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: shoot apex, hypocotyl, root; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: CAPRICE-like MYB3 (TAIR:AT4G01060.1); Has 2220 Blast hits to 2220 proteins in 165 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2207; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). ETC1 is involved in trichome and root hair patterning in Arabidopsis. Homeodomain-like superfamily protein1+View
AT5G53200TRIPTYCHON (TRY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G30420.1); Has 2274 Blast hits to 2274 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 2256; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). Homeodomain-like superfamily protein5+View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00003G00560No description available.supercontig_3-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G43180MYB family transcription factor, putative, expressed1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G16890No description available.Chr02-View
PT14G09630No description available.Chr14-View
PT15G02200No description available.Chr15+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G095640Myb family transcription factor (AHRD V1 **** D7LC50_ARALY)%3B contains Interpro domain(s) IPR015495 Myb transcription factorch01-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G06130name=GSVIVG01027071001;chr15+View
VV16G06820name=GSVIVG01028716001;chr16-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G37390No description available.3+View


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Gene id
Species
Description
Chromosome
Strand