Anchorpoints

Gene id
AT3G61230
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G01780Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. GATA type zinc finger transcription factor family protein GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G45800.1); Has 4819 Blast hits to 3002 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 4032; Fungi - 22; Plants - 446; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink).1+View
AT2G45800GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT3G61230.1); Has 6011 Blast hits to 3830 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 5054; Fungi - 46; Plants - 459; Viruses - 0; Other Eukaryotes - 452 (source: NCBI BLink). Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. GATA type zinc finger transcription factor family protein2-View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD5G16666No description available.Bd5-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00018G02190No description available.supercontig_18-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G42820OsPLIM2a - LIM domain protein, putative actin-binding protein and transcription factor, expressed2-View
OS04G45010OsPLIM2b - LIM domain protein, putative actin-binding protein and transcription factor, expressed4-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G41040No description available.Chr02-View
OSINDICA_04G37100No description available.Chr04-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G10710No description available.Chr01+View
PT14G08090No description available.Chr14-View
PT02G15730No description available.Chr02-View
PT03G12430No description available.Chr03-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB06G023600No description available.chr_6-View
SB04G033700No description available.chr_4+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI001G26160No description available.scaffold_1-View
SI007G18620No description available.scaffold_7-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G094320Cysteine and glycine-rich protein 3 (AHRD V1 **-- D2SQP3_PIG)%3B contains Interpro domain(s) IPR001781 Zinc finger%2C LIM-typech01-View
SL10G017520Cysteine and glycine-rich protein 3 (AHRD V1 **-- D2SQP3_PIG)%3B contains Interpro domain(s) IPR001781 Zinc finger%2C LIM-typech10+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM04G19810No description available.4-View
ZM05G34810No description available.5-View
ZM02G08590No description available.2+View
ZM10G20900No description available.10-View


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Gene id
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Description
Chromosome
Strand