PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: AT3G55605
Organism: Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
AT5G02050	Mitochondrial glycoprotein family protein Mitochondrial glycoprotein family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT3G55605.1); Has 498 Blast hits to 497 proteins in 162 species: Archae - 0; Bacteria - 2; Metazoa - 46; Fungi - 134; Plants - 219; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink).	5	-	View
AT2G39790	Mitochondrial glycoprotein family protein Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, mitochondrial matrix; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT2G39795.1); Has 277 Blast hits to 277 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 68; Plants - 185; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).	2	+	View
AT5G05990	Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT3G55605.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Mitochondrial glycoprotein family protein	5	-	View

Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id	Description	Chromosome	Strand	Multiplicon
BD2G23470	No description available.	Bd2	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT06G09070	No description available.	Chr06	+	View
PT10G19850	No description available.	Chr10	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL09G011250	Mitochondrial glycoprotein (AHRD V1 ***- B6UFZ9_MAIZE)%3B contains Interpro domain(s) IPR003428 Mitochondrial glycoprotein	ch09	+	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV13G04670	name=GSVIVG01016468001;	chr13	+	View