PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: AT3G55550
Organism: Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
AT2G29220	Concanavalin A-like lectin protein kinase family protein Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT2G29250.1); Has 78093 Blast hits to 77063 proteins in 2493 species: Archae - 51; Bacteria - 5855; Metazoa - 27961; Fungi - 5428; Plants - 28546; Viruses - 215; Other Eukaryotes - 10037 (source: NCBI BLink).	2	-	View

Orthologs (inter-species colinear regions)

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00001G04260	No description available.	supercontig_1	-	View

Musa acuminata

Gene id	Description	Chromosome	Strand	Multiplicon
MA07G10890	CC_gene:CRK40,CC_gene:CRK15,CC_gene:CRK7,CC_gene:CRK27,CC_gene:CRK42,CC_gene:LECRKA4.3,CC_gene:LECRKA4.2,CC_gene:LECRKA4.1,CC_functional_completeness:fragment,PRODUCT:Putative Lectin-domain containing receptor kinase A4.1,GO:0006468,GO:0005524,GO:0005488,GO:0004674,GO:0004672,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:2.7.11.25	chr7	-	View
MA09G03520	CC_gene:At1g56130,CC_gene:CRK23,CC_gene:At1g53430,CC_gene:At1g07650,CC_gene:At1g56140,CC_gene:LECRKA4.1,CC_gene:LECRKA4.2,CC_gene:LECRKA4.3,CC_functional_completeness:fragment,PRODUCT:Putative Lectin-domain containing receptor kinase A4.3,GO:0006468,GO:0005524,GO:0005488,GO:0004674,GO:0004672,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:2.7.11.25	chr9	-	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS03G60810	lectin-like receptor kinase, putative, expressed	3	-	View

Oryza sativa ssp. indica

Gene id	Description	Chromosome	Strand	Multiplicon
OSINDICA_03G58000	No description available.	Chr03	-	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT10G20060	No description available.	Chr10	+	View
PT06G08840	No description available.	Chr06	-	View
PT08G05840	No description available.	Chr08	-	View

Setaria italica

Gene id	Description	Chromosome	Strand	Multiplicon
SI009G03010	No description available.	scaffold_9	+	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL09G011060	Receptor like protein kinase (AHRD V1 **** Q39139_ARATH)%3B contains Interpro domain(s) IPR001220 Legume lectin%2C beta chain	ch09	-	View
SL10G084860	Receptor like protein kinase (AHRD V1 **** Q39139_ARATH)%3B contains Interpro domain(s) IPR001220 Legume lectin%2C beta chain	ch10	-	View
SL05G053010	Receptor like protein kinase (AHRD V1 **** Q39139_ARATH)%3B contains Interpro domain(s) IPR001220 Legume lectin%2C beta chain	ch05	+	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV13G04960	name=GSVIVG01016502001;	chr13	-	View