Anchorpoints

Gene id
AT3G55090
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G39350ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G55090.1); Has 383683 Blast hits to 350637 proteins in 4113 species: Archae - 6942; Bacteria - 305769; Metazoa - 8575; Fungi - 6049; Plants - 5390; Viruses - 9; Other Eukaryotes - 50949 (source: NCBI BLink). ABC-2 type transporter family protein2-View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G66110No description available.Bd1-View
BD2G54300No description available.Bd2+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00114G00170No description available.supercontig_114+View
CP00001G02930No description available.supercontig_1-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G17350white-brown complex homolog protein, putative, expressed3+View
OS01G61940white-brown complex homolog protein, putative, expressed1+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_01G58630No description available.Chr01+View
OSINDICA_03G15960No description available.Chr03+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G21340No description available.Chr10+View
PT08G04790No description available.Chr08-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G038970No description available.chr_1-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G46070No description available.scaffold_9-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G005970ABC transporter G family member 2 (AHRD V1 ***- AB2G_ARATH)%3B contains Interpro domain(s) IPR013525 ABC-2 type transporterch09+View
SL05G054890ABC transporter G family member 1 (AHRD V1 **** AB1G_ARATH)%3B contains Interpro domain(s) IPR013525 ABC-2 type transporterch05+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G02050name=GSVIVG01025582001;chr8+View
VV13G08790name=GSVIVG01032625001;chr13-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G11800ATPase, coupled to transmembrane movement of substances1+View


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Gene id
Species
Description
Chromosome
Strand