Anchorpoints
- Gene id
- AT3G55090
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G39350 | ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G55090.1); Has 383683 Blast hits to 350637 proteins in 4113 species: Archae - 6942; Bacteria - 305769; Metazoa - 8575; Fungi - 6049; Plants - 5390; Viruses - 9; Other Eukaryotes - 50949 (source: NCBI BLink). ABC-2 type transporter family protein | 2 | - | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD1G66110 | No description available. | Bd1 | - | View |
BD2G54300 | No description available. | Bd2 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00114G00170 | No description available. | supercontig_114 | + | View |
CP00001G02930 | No description available. | supercontig_1 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS03G17350 | white-brown complex homolog protein, putative, expressed | 3 | + | View |
OS01G61940 | white-brown complex homolog protein, putative, expressed | 1 | + | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_01G58630 | No description available. | Chr01 | + | View |
OSINDICA_03G15960 | No description available. | Chr03 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT10G21340 | No description available. | Chr10 | + | View |
PT08G04790 | No description available. | Chr08 | - | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB01G038970 | No description available. | chr_1 | - | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI009G46070 | No description available. | scaffold_9 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL09G005970 | ABC transporter G family member 2 (AHRD V1 ***- AB2G_ARATH)%3B contains Interpro domain(s) IPR013525 ABC-2 type transporter | ch09 | + | View |
SL05G054890 | ABC transporter G family member 1 (AHRD V1 **** AB1G_ARATH)%3B contains Interpro domain(s) IPR013525 ABC-2 type transporter | ch05 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV08G02050 | name=GSVIVG01025582001; | chr8 | + | View |
VV13G08790 | name=GSVIVG01032625001; | chr13 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM01G11800 | ATPase, coupled to transmembrane movement of substances | 1 | + | View |