Anchorpoints

Gene id
AT3G51260
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G66140Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation. proteasome alpha subunit D2 (PAD2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, proteasome core complex, alpha-subunit complex, chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit PAD1 (TAIR:AT3G51260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). proteasome alpha subunit D25-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G02720No description available.supercontig_6+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA01G07840CC_gene:OsI_029135,CC_gene:Os08g0548900,CC_gene:PAD2,CC_gene:PAD1,CC_functional_completeness:fragment,PRODUCT:Proteasome subunit alpha type (Fragment),CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV04G00490name=GSVIVG01018748001;chr4+View


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Gene id
Species
Description
Chromosome
Strand