PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: AT3G51250
Organism: Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
AT2G17840	Senescence/dehydration-associated protein-related EARLY-RESPONSIVE TO DEHYDRATION 7 (ERD7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to high light intensity, response to salt stress, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Senescence/spartin-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: Senescence/dehydration-associated protein-related (TAIR:AT4G35985.1); Has 250 Blast hits to 250 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 39; Plants - 134; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis.	2	-	View

Orthologs (inter-species colinear regions)

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00006G02700	No description available.	supercontig_6	+	View

Musa acuminata

Gene id	Description	Chromosome	Strand	Multiplicon
MA01G07860	CC_gene:Spg20,CC_gene:SPG20,CC_functional_completeness:complete,PRODUCT:senescence-associated protein%2C putative%2C expressed,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number	chr1	-	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT05G11160	No description available.	Chr05	+	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL02G083690	Senescence-associated protein 12 (AHRD V1 -- O81657_HEMSP)%3B contains Interpro domain(s) IPR009686 Senescence-associated	ch02	-	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV04G00510	name=GSVIVG01018750001;	chr4	+	View