Anchorpoints

Gene id
AT3G26130
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G13130Cellulase (glycosyl hydrolase family 5) protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Ricin B-related lectin (InterPro:IPR008997), Ricin B lectin (InterPro:IPR000772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Cellulase (glycosyl hydrolase family 5) protein (TAIR:AT3G26140.1); Has 343 Blast hits to 335 proteins in 115 species: Archae - 2; Bacteria - 129; Metazoa - 0; Fungi - 78; Plants - 115; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). Cellulase (glycosyl hydrolase family 5) protein1+View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00033G00590No description available.supercontig_33+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G38260glycosyl hydrolase family 5 protein, putative, expressed2+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G04970No description available.Chr10+View
PT08G18340No description available.Chr08-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB04G024910No description available.chr_4+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI001G22950No description available.scaffold_1+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G013810Glycosyl hydrolase family 5 protein/cellulase (AHRD V1 **-- A8NVS8_COPC7)%3B contains Interpro domain(s) IPR001547 Glycoside hydrolase%2C family 5ch05+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G00340name=GSVIVG01000573001;chr1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM02G12180No description available.2-View


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Gene id
Species
Description
Chromosome
Strand