Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT3G22890
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G43780 | APS4; FUNCTIONS IN: sulfate adenylyltransferase (ATP) activity; INVOLVED IN: sulfate assimilation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase/archaeosine transglycosylase-like family protein (TAIR:AT4G14680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Pseudouridine synthase/archaeosine transglycosylase-like family protein sulfate adenylyltransferase, ATP sulfurylase | 5 | - | View |
| AT4G14680 | Pseudouridine synthase/archaeosine transglycosylase-like family protein ATP sulfurylase APS3; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: ATP sulfurylase 1 (TAIR:AT3G22890.1); Has 2059 Blast hits to 2056 proteins in 649 species: Archae - 98; Bacteria - 865; Metazoa - 242; Fungi - 201; Plants - 189; Viruses - 0; Other Eukaryotes - 464 (source: NCBI BLink). | 4 | - | View |
Orthologs (inter-species colinear regions)
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00044G01300 | No description available. | supercontig_44 | + | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA01G14640 | CC_gene:sat,CC_gene:Papss2,CC_gene:PAPSS1,CC_gene:Papss1,CC_gene:PAPSS2,CC_functional_completeness:fragment,PRODUCT:Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2,GO:0004781,GO:0000103,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:2.7.7.4 | chr1 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS03G53230 | bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed | 3 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT10G08120 | No description available. | Chr10 | - | View |
| PT08G15900 | No description available. | Chr08 | + | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI009G09510 | No description available. | scaffold_9 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL03G005250 | Sulfate adenylyltransferase (AHRD V1 **** Q43170_SOLTU)%3B contains Interpro domain(s) IPR002650 ATP-sulfurylase | ch03 | - | View |
| SL09G082860 | Sulfate adenylyltransferase (AHRD V1 **** Q43183_SOLTU)%3B contains Interpro domain(s) IPR002650 ATP-sulfurylase | ch09 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV05G05560 | name=GSVIVG01018057001; | chr5 | + | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM01G52400 | No description available. | 1 | - | View |