Anchorpoints

Gene id
AT3G18490
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G25510Eukaryotic aspartyl protease family protein Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 4139 Blast hits to 4120 proteins in 342 species: Archae - 0; Bacteria - 0; Metazoa - 1183; Fungi - 740; Plants - 2035; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink).1-View
AT1G49050Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G77480.1); Has 2436 Blast hits to 2429 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 552; Fungi - 119; Plants - 1682; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). Eukaryotic aspartyl protease family protein1+View


Orthologs (inter-species colinear regions)

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G12820No description available.Chr10-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G009680Aspartic proteinase nepenthesin I (AHRD V1 **-- A9ZMF9_NEPAL)%3B contains Interpro domain(s) IPR001461 Peptidase A1ch05-View
SL06G069190Nucellin-like aspartic protease (Fragment) (AHRD V1 **-- Q8L886_MAIZE)%3B contains Interpro domain(s) IPR001461 Peptidase A1ch06-View
SL03G119690Aspartic proteinase nepenthesin-1 (AHRD V1 **-- C0JAA3_9ORYZ)%3B contains Interpro domain(s) IPR001461 Peptidase A1ch03-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G08070name=GSVIVG01011932001;chr1+View
VV17G05830name=GSVIVG01008267001;chr17-View


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Description
Chromosome
Strand