Anchorpoints

Gene id
AT3G16850
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G48950Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: central cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G23900.1); Has 4179 Blast hits to 4160 proteins in 504 species: Archae - 6; Bacteria - 1499; Metazoa - 14; Fungi - 1097; Plants - 1422; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink).3+View


Orthologs (inter-species colinear regions)

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G075460Polygalacturonase-like protein-like (AHRD V1 ***- Q2XTD7_SOLTU)%3B contains Interpro domain(s) IPR012334 Pectin lyase foldch09+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G12280name=GSVIVG01035089001;chr5-View
VV07G08760name=GSVIVG01028057001;chr7+View


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Gene id
Species
Description
Chromosome
Strand