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WorkbenchAnchorpoints
- Gene id
- AT3G11170
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G05580 | Encodes a temperature sensitive plastidic fatty acid desaturase. fatty acid desaturase 8 (FAD8); FUNCTIONS IN: omega-3 fatty acid desaturase activity; INVOLVED IN: response to temperature stimulus, fatty acid biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 7 (TAIR:AT3G11170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). fatty acid desaturase 8 | 5 | + | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD4G45037 | No description available. | Bd4 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00011G01030 | No description available. | supercontig_11 | + | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA09G04560 | CC_gene:FAD3,CC_gene:ARG1,CC_gene:FAD8,CC_gene:FAD7A-1,CC_gene:FAD7,CC_functional_completeness:complete,PRODUCT:Omega-3 fatty acid desaturase%2C chloroplastic,GO:0055114,GO:0016491,GO:0006629,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:1.14.99.33 | chr9 | - | View |
| MA05G30170 | CC_gene:FAD3,CC_gene:ARG1,CC_gene:FAD8,CC_gene:FAD7,CC_gene:FAD7A-1,CC_functional_completeness:complete,PRODUCT:Omega-3 fatty acid desaturase%2C chloroplastic,GO:0055114,GO:0016491,GO:0006629,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:1.14.99.33 | chr5 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS12G01370 | fatty acid desaturase, putative, expressed | 12 | - | View |
| OS11G01340 | omega-3 fatty acid desaturase, chloroplast precursor, putative, expressed | 11 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT16G11750 | No description available. | Chr16 | - | View |
| PT08G06960 | No description available. | Chr08 | - | View |
| PT10G18780 | No description available. | Chr10 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV13G10340 | name=GSVIVG01032803001; | chr13 | - | View |