Anchorpoints

Gene id
AT3G09220
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G01040laccase 8 (LAC8); FUNCTIONS IN: laccase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, response to copper ion; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: fruit, root, flower; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT5G01050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). laccase 8 putative laccase, knockout mutant showed early flowering5-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00019G02140No description available.supercontig_19-View
CP00056G00660No description available.supercontig_56+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA09G03810CC_gene:LAC17,CC_gene:LAC4,CC_gene:LAC11,CC_gene:LAC2,CC_gene:LAC16,CC_gene:LAC10,CC_gene:IRX12,CC_gene:LAC22,CC_functional_completeness:complete,PRODUCT:Laccase-22,GO:0055114,GO:0048046,GO:0046274,GO:0016491,GO:0008471,GO:0005507,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:1.10.3.3chr9-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS11G48060Laccase-22 laccase-22 precursor, putative, expressed11+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_01G59810No description available.Chr01+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G09410No description available.Chr06+View
PT16G11200No description available.Chr16+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI008G01760No description available.scaffold_8-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G011960Laccase (AHRD V1 ***- O24042_LIRTU)%3B contains Interpro domain(s) IPR017761 Laccasech09+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G13250name=GSVIVG01034003001;chr8+View
VV08G13570name=GSVIVG01034040001;chr8+View
VV08G14370name=GSVIVG01034146001;chr8+View


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Gene id
Species
Description
Chromosome
Strand