Anchorpoints
- Gene id
- AT3G09220
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G01040 | laccase 8 (LAC8); FUNCTIONS IN: laccase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, response to copper ion; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: fruit, root, flower; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT5G01050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). laccase 8 putative laccase, knockout mutant showed early flowering | 5 | - | View |
Orthologs (inter-species colinear regions)
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00019G02140 | No description available. | supercontig_19 | - | View |
CP00056G00660 | No description available. | supercontig_56 | + | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA09G03810 | CC_gene:LAC17,CC_gene:LAC4,CC_gene:LAC11,CC_gene:LAC2,CC_gene:LAC16,CC_gene:LAC10,CC_gene:IRX12,CC_gene:LAC22,CC_functional_completeness:complete,PRODUCT:Laccase-22,GO:0055114,GO:0048046,GO:0046274,GO:0016491,GO:0008471,GO:0005507,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:1.10.3.3 | chr9 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS11G48060 | Laccase-22 laccase-22 precursor, putative, expressed | 11 | + | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_01G59810 | No description available. | Chr01 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT06G09410 | No description available. | Chr06 | + | View |
PT16G11200 | No description available. | Chr16 | + | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI008G01760 | No description available. | scaffold_8 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL09G011960 | Laccase (AHRD V1 ***- O24042_LIRTU)%3B contains Interpro domain(s) IPR017761 Laccase | ch09 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV08G13250 | name=GSVIVG01034003001; | chr8 | + | View |
VV08G13570 | name=GSVIVG01034040001; | chr8 | + | View |
VV08G14370 | name=GSVIVG01034146001; | chr8 | + | View |