Anchorpoints

Gene id
AT3G01220
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G15150homeobox-containing gene with an unusual feature: a leucine zipper motif adjacent to the carboxyl-terminal of the homeodomain structure. This gene is expressed primarily in the cortex of the root and the stem. homeobox 3 (HB-3); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 20 (TAIR:AT3G01220.1); Has 11268 Blast hits to 11217 proteins in 570 species: Archae - 0; Bacteria - 6; Metazoa - 8826; Fungi - 177; Plants - 2030; Viruses - 5; Other Eukaryotes - 224 (source: NCBI BLink). homeobox 35-View


Orthologs (inter-species colinear regions)

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT17G08170No description available.Chr17+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G087840Homeobox-leucine zipper-like protein (AHRD V1 *-*- Q3HRT1_PICGL)%3B contains Interpro domain(s) IPR001356 Homeoboxch02-View
SL02G067410Homeobox-leucine zipper-like protein (AHRD V1 *-*- Q3HRT1_PICGL)%3B contains Interpro domain(s) IPR001356 Homeoboxch02+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G01870name=GSVIVG01011377001;chr14-View


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Gene id
Species
Description
Chromosome
Strand