Anchorpoints
- Gene id
- AT2G47000
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G62150 | P-glycoprotein 21 (PGP21); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B4 (TAIR:AT2G47000.1); Has 850676 Blast hits to 393228 proteins in 4171 species: Archae - 14744; Bacteria - 664075; Metazoa - 17906; Fungi - 12823; Plants - 9925; Viruses - 47; Other Eukaryotes - 131156 (source: NCBI BLink). Encodes a facultative transporter controlling auxin concentrations in plant cells. P-glycoprotein 21 | 3 | - | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD2G11210 | No description available. | Bd2 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00003G01950 | No description available. | supercontig_3 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA01G26030 | CC_gene:ABCB7,CC_gene:ABCB9,CC_gene:ABCB4,CC_gene:ABCB5,CC_gene:ABCB21,CC_gene:ABCB3,CC_gene:ABCB12,CC_gene:ABCB11,CC_functional_completeness:fragment,PRODUCT:Putative ABC transporter B family member 11,GO:0055085,GO:0016021,GO:0006810,GO:0005524,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.6.3.44 | chr1 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS05G04610 | ABC transporter, ATP-binding protein, putative, expressed | 5 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT02G18740 | No description available. | Chr02 | - | View |
PT14G11300 | No description available. | Chr14 | - | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB09G002940 | No description available. | chr_9 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G009280 | Lipid A export ATP-binding/permease protein msbA (AHRD V1 *--- MSBA_SYNAS)%3B contains Interpro domain(s) IPR003439 ABC transporter-like | ch06 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV05G02550 | name=GSVIVG01017696001; | chr5 | + | View |
VV07G10390 | name=GSVIVG01028256001; | chr7 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM03G10370 | No description available. | 3 | - | View |