Anchorpoints

Gene id
AT2G47000
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G62150P-glycoprotein 21 (PGP21); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B4 (TAIR:AT2G47000.1); Has 850676 Blast hits to 393228 proteins in 4171 species: Archae - 14744; Bacteria - 664075; Metazoa - 17906; Fungi - 12823; Plants - 9925; Viruses - 47; Other Eukaryotes - 131156 (source: NCBI BLink). Encodes a facultative transporter controlling auxin concentrations in plant cells. P-glycoprotein 213-View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G11210No description available.Bd2-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00003G01950No description available.supercontig_3-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA01G26030CC_gene:ABCB7,CC_gene:ABCB9,CC_gene:ABCB4,CC_gene:ABCB5,CC_gene:ABCB21,CC_gene:ABCB3,CC_gene:ABCB12,CC_gene:ABCB11,CC_functional_completeness:fragment,PRODUCT:Putative ABC transporter B family member 11,GO:0055085,GO:0016021,GO:0006810,GO:0005524,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.6.3.44chr1+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS05G04610ABC transporter, ATP-binding protein, putative, expressed5+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G18740No description available.Chr02-View
PT14G11300No description available.Chr14-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB09G002940No description available.chr_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G009280Lipid A export ATP-binding/permease protein msbA (AHRD V1 *--- MSBA_SYNAS)%3B contains Interpro domain(s) IPR003439 ABC transporter-likech06-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G02550name=GSVIVG01017696001;chr5+View
VV07G10390name=GSVIVG01028256001;chr7-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G10370No description available.3-View


Download

Gene id
Species
Description
Chromosome
Strand