Anchorpoints

Gene id
AT2G45800
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G01780Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. GATA type zinc finger transcription factor family protein GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G45800.1); Has 4819 Blast hits to 3002 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 4032; Fungi - 22; Plants - 446; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink).1+View
AT3G61230GATA type zinc finger transcription factor family protein Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G45800.1); Has 5500 Blast hits to 3584 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 4540; Fungi - 25; Plants - 547; Viruses - 0; Other Eukaryotes - 388 (source: NCBI BLink).3-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00018G02190No description available.supercontig_18-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT14G08090No description available.Chr14-View
PT02G15730No description available.Chr02-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G049870Cysteine and glycine-rich protein 2 (AHRD V1 **-- B5X6P9_SALSA)%3B contains Interpro domain(s) IPR001781 Zinc finger%2C LIM-typech05+View
SL10G017520Cysteine and glycine-rich protein 3 (AHRD V1 **-- D2SQP3_PIG)%3B contains Interpro domain(s) IPR001781 Zinc finger%2C LIM-typech10+View
SL01G094320Cysteine and glycine-rich protein 3 (AHRD V1 **-- D2SQP3_PIG)%3B contains Interpro domain(s) IPR001781 Zinc finger%2C LIM-typech01-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV02G06870name=GSVIVG01019807001;chr2-View


Download

Gene id
Species
Description
Chromosome
Strand