Anchorpoints
- Gene id
- AT2G39720
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G59550 | Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants. zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G46620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). zinc finger (C3HC4-type RING finger) family protein | 5 | - | View |
Orthologs (inter-species colinear regions)
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00081G01150 | No description available. | supercontig_81 | + | View |
CP00019G02820 | No description available. | supercontig_19 | + | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA10G23060 | CC_gene:AIP2,CC_gene:Rnf181,CC_gene:rnf126,CC_gene:rnf181,CC_gene:RING1,CC_gene:At3g19950,CC_functional_completeness:fragment,PRODUCT:zinc finger%2C RING-type%2C putative%2C expressed,GO:0008270,GO:0005515,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr10 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS01G62640 | zinc finger, C3HC4 type domain containing protein, expressed | 1 | - | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_01G59380 | No description available. | Chr01 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT06G21620 | No description available. | Chr06 | + | View |
PT10G20130 | No description available. | Chr10 | + | View |
PT06G08780 | No description available. | Chr06 | - | View |
PT08G05810 | No description available. | Chr08 | - | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI005G38730 | No description available. | scaffold_5 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL09G007060 | RING finger protein 44 (AHRD V1 *--- RNF44_RAT)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch09 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV13G05030 | name=GSVIVG01016510001; | chr13 | - | View |