Anchorpoints

Gene id
AT2G39720
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G59550Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants. zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G46620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). zinc finger (C3HC4-type RING finger) family protein5-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00081G01150No description available.supercontig_81+View
CP00019G02820No description available.supercontig_19+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA10G23060CC_gene:AIP2,CC_gene:Rnf181,CC_gene:rnf126,CC_gene:rnf181,CC_gene:RING1,CC_gene:At3g19950,CC_functional_completeness:fragment,PRODUCT:zinc finger%2C RING-type%2C putative%2C expressed,GO:0008270,GO:0005515,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G62640zinc finger, C3HC4 type domain containing protein, expressed1-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_01G59380No description available.Chr01-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G21620No description available.Chr06+View
PT10G20130No description available.Chr10+View
PT06G08780No description available.Chr06-View
PT08G05810No description available.Chr08-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI005G38730No description available.scaffold_5-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G007060RING finger protein 44 (AHRD V1 *--- RNF44_RAT)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech09+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G05030name=GSVIVG01016510001;chr13-View


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Gene id
Species
Description
Chromosome
Strand