Anchorpoints

Gene id
AT2G39640
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G55430O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). O-Glycosyl hydrolases family 17 protein3-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00081G01470No description available.supercontig_81+View
CP00001G03960No description available.supercontig_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G20380No description available.Chr10+View
PT08G05590No description available.Chr08-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G076170Glucan endo-1 3-beta-glucosidase (AHRD V1 ***- B6U1F1_MAIZE)%3B contains Interpro domain(s) IPR013781 Glycoside hydrolase%2C subgroup%2C catalytic corech06-View
SL05G054440Glucan endo-1 3-beta-glucosidase (AHRD V1 ***- B6TY63_MAIZE)%3B contains Interpro domain(s) IPR013781 Glycoside hydrolase%2C subgroup%2C catalytic corech05+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G05340name=GSVIVG01016553001;chr13+View


Download

Gene id
Species
Description
Chromosome
Strand