Anchorpoints

Gene id
AT2G38090
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G58900Homeodomain-like transcriptional regulator; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT2G38090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Homeodomain-like transcriptional regulator5-View
AT5G01200Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT2G38090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Duplicated homeodomain-like superfamily protein5+View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G55217No description available.Bd2-View
BD2G23710No description available.Bd2+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00019G02120No description available.supercontig_19-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G63460MYB family transcription factor, putative, expressed1-View
OS05G37730MYB family transcription factor, putative, expressed5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G19300No description available.Chr10-View
PT06G09730No description available.Chr06+View
PT09G04260No description available.Chr09+View
PT01G24880No description available.Chr01+View
PT16G11230No description available.Chr16+View
PT08G06420No description available.Chr08+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB03G040160No description available.chr_3-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G096350Myb family transcription factor (Fragment) (AHRD V1 **-* D7M1F0_ARALY)%3B contains Interpro domain(s) IPR006447 Myb-like DNA-binding region%2C SHAQKYF classch03-View
SL10G076820Myb family transcription factor (Fragment) (AHRD V1 **-- D7M1F0_ARALY)%3B contains Interpro domain(s) IPR006447 Myb-like DNA-binding region%2C SHAQKYF classch10+View
SL09G014250Myb family transcription factor (Fragment) (AHRD V1 **-* D7M1F0_ARALY)%3B contains Interpro domain(s) IPR006447 Myb-like DNA-binding region%2C SHAQKYF classch09+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G03920name=GSVIVG01016370001;chr13+View
VV06G02260name=GSVIVG01024794001;chr6+View
VV08G13240name=GSVIVG01034001001;chr8+View


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Gene id
Species
Description
Chromosome
Strand