Anchorpoints
- Gene id
- AT2G38080
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G58910 | laccase 16 laccase 16 (LAC16); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: apoplast; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Laccase (InterPro:IPR017761), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT2G38080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). putative laccase, a member of laccase family of genes (17 members in Arabidopsis). | 5 | - | View |
Orthologs (inter-species colinear regions)
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00019G02140 | No description available. | supercontig_19 | - | View |
CP00056G01000 | No description available. | supercontig_56 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT09G04250 | No description available. | Chr09 | + | View |
PT01G24870 | No description available. | Chr01 | + | View |
PT10G19310 | No description available. | Chr10 | - | View |
PT08G06400 | No description available. | Chr08 | + | View |
PT06G09410 | No description available. | Chr06 | + | View |
PT16G11200 | No description available. | Chr16 | + | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI005G39170 | No description available. | scaffold_5 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL10G076830 | Laccase 1a (AHRD V1 ***- B9IG56_POPTR)%3B contains Interpro domain(s) IPR017761 Laccase | ch10 | - | View |
SL10G085090 | Laccase 1a (AHRD V1 **** B9IG56_POPTR)%3B contains Interpro domain(s) IPR017761 Laccase | ch10 | + | View |
SL09G011960 | Laccase (AHRD V1 ***- O24042_LIRTU)%3B contains Interpro domain(s) IPR017761 Laccase | ch09 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV08G13250 | name=GSVIVG01034003001; | chr8 | + | View |
VV13G03930 | name=GSVIVG01016372001; | chr13 | + | View |
VV06G02270 | name=GSVIVG01024795001; | chr6 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM03G26820 | laccase 1 | 3 | - | View |