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WorkbenchAnchorpoints
- Gene id
- AT2G36490
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G10010 | demeter-like 2 demeter-like 2 (DML2); FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, catalytic activity, endonuclease activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3292 Blast hits to 3211 proteins in 1332 species: Archae - 246; Bacteria - 2331; Metazoa - 80; Fungi - 82; Plants - 273; Viruses - 0; Other Eukaryotes - 280 (source: NCBI BLink). Encodes a protein with DNA glycosylase activity that is involved in maintaining methylation marks. | 3 | - | View |
Orthologs (inter-species colinear regions)
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00005G00770 | No description available. | supercontig_5 | - | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA10G15850 | CC_gene:MJ1434,CC_gene:NTH1,CC_gene:nth,CC_gene:DML3,CC_gene:DML2,CC_gene:ROS1,CC_gene:DME,CC_functional_completeness:fragment,PRODUCT:Whole genome shotgun sequence of line PN40024%2C scaffold_7.assembly12x (Fragment),GO:0006284,GO:0006281,GO:0004519,GO:0003824,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:4.2.99.18 | chr10 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT08G02590 | No description available. | Chr08 | - | View |
| PT10G23440 | No description available. | Chr10 | + | View |
| PT06G11600 | No description available. | Chr06 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL11G007580 | HhH-GPD family protein (AHRD V1 *--- D1CFH3_THET1)%3B contains Interpro domain(s) IPR003265 HhH-GPD domain | ch11 | - | View |
| SL09G009080 | Repressor of silencing 1 (AHRD V1 **-- A4PF88_TOBAC)%3B contains Interpro domain(s) IPR003265 HhH-GPD domain | ch09 | + | View |
| SL10G083630 | Repressor of silencing 2b (AHRD V1 **-- A4PF90_TOBAC)%3B contains Interpro domain(s) IPR003265 HhH-GPD domain | ch10 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV08G11460 | name=GSVIVG01033777001; | chr8 | - | View |
| VV06G08340 | name=GSVIVG01031400001; | chr6 | + | View |