Anchorpoints
- Gene id
- AT2G30260
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G06960 | RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U2 small nuclear ribonucleoprotein B (TAIR:AT2G30260.1); Has 1664 Blast hits to 1652 proteins in 256 species: Archae - 0; Bacteria - 2; Metazoa - 815; Fungi - 369; Plants - 285; Viruses - 1; Other Eukaryotes - 192 (source: NCBI BLink). RNA-binding (RRM/RBD/RNP motifs) family protein | 1 | + | View |
Orthologs (inter-species colinear regions)
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00002G03180 | No description available. | supercontig_2 | + | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA03G10100 | CC_gene:snrpb2,CC_gene:snrpa,CC_gene:Snrpa,CC_gene:SNRPA,CC_gene:SNRPB2,CC_gene:Snrpb2,CC_functional_completeness:complete,PRODUCT:U2 small nuclear ribonucleoprotein B'',GO:0003676,GO:0000166,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr3 | + | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_03G17520 | No description available. | Chr03 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT13G15370 | No description available. | Chr13 | - | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB01G038060 | No description available. | chr_1 | + | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI009G44930 | No description available. | scaffold_9 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G082360 | U2 small nuclear ribonucleoprotein B (AHRD V1 ***- A8QKB2_MUSSP)%3B contains Interpro domain(s) IPR012677 Nucleotide-binding%2C alpha-beta plait | ch06 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV06G00880 | name=GSVIVG01024622001; | chr6 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM09G22890 | spliceosomal protein | 9 | + | View |