Anchorpoints
- Gene id
- AT2G30210
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G40370 | laccase 5 laccase 5 (LAC5); FUNCTIONS IN: laccase activity; INVOLVED IN: response to copper ion; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 10120 Blast hits to 8186 proteins in 1337 species: Archae - 37; Bacteria - 4008; Metazoa - 431; Fungi - 3685; Plants - 1575; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). putative laccase, a member of laccase family of genes (17 members in Arabidopsis). | 2 | - | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD2G53800 | No description available. | Bd2 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00002G03320 | No description available. | supercontig_2 | + | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA03G10130 | CC_gene:LAC14,CC_gene:LAC13,CC_gene:LAC23,CC_gene:LAC17,CC_gene:LAC5,CC_gene:LAC12,CC_gene:LAC3,CC_functional_completeness:complete,PRODUCT:Laccase-3,GO:0055114,GO:0048046,GO:0046274,GO:0016491,GO:0008471,GO:0005507,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:1.10.3.3 | chr3 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS11G01730 | laccase-23 precursor, putative, expressed Putative laccase-17 | 11 | + | View |
OS12G01730 | laccase-23 precursor, putative, expressed Laccase-23 | 12 | + | View |
OS01G61160 | laccase precursor protein, putative, expressed Laccase-3 | 1 | + | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_03G17400 | No description available. | Chr03 | + | View |
OSINDICA_11G00180 | No description available. | Chr11 | + | View |
OSINDICA_01G57800 | No description available. | Chr01 | + | View |
OSINDICA_12G00860 | No description available. | Chr12 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT13G15270 | No description available. | Chr13 | - | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB03G038550 | No description available. | chr_3 | + | View |
SB01G038130 | No description available. | chr_1 | - | View |
SB08G000720 | No description available. | chr_8 | + | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI005G37400 | No description available. | scaffold_5 | + | View |
SI009G45020 | No description available. | scaffold_9 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G082240 | Laccase-13 (AHRD V1 ***- D7LZX9_ARALY)%3B contains Interpro domain(s) IPR017761 Laccase | ch06 | + | View |
SL06G050530 | Laccase (AHRD V1 ***- Q9ZP47_POPTR)%3B contains Interpro domain(s) IPR017761 Laccase | ch06 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV13G09850 | name=GSVIVG01032744001; | chr13 | - | View |
VV06G00980 | name=GSVIVG01024634001; | chr6 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM03G28090 | L-ascorbate oxidase | 3 | - | View |