Anchorpoints

Gene id
AT2G28830
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G46510plant U-box 13 plant U-box 13 (PUB13); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1); Has 8308 Blast hits to 5676 proteins in 314 species: Archae - 6; Bacteria - 52; Metazoa - 2498; Fungi - 809; Plants - 4013; Viruses - 3; Other Eukaryotes - 927 (source: NCBI BLink). Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. Involved in ubiquitination of pattern recognition receptor FLS2.3-View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G66610No description available.Bd1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00081G01700No description available.supercontig_81+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA06G35040CC_gene:PUB10,CC_gene:PUB15,CC_gene:PUB14,CC_gene:PUB12,CC_gene:PUB13,CC_gene:SPL11,CC_functional_completeness:complete,PRODUCT:E3 ubiquitin-protein ligase SPL11,GO:0016567,GO:0005488,GO:0004842,GO:0000151,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr6+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G16824spotted leaf 11, putative, expressed3+View
OS12G38210spotted leaf 11, putative, expressed12-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_12G26180No description available.Chr12-View
OSINDICA_03G15220No description available.Chr03+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G02960No description available.Chr09-View
PT01G23850No description available.Chr01-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G46600No description available.scaffold_9-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G066040U-box domain-containing protein 13 (AHRD V1 **-- PUB13_ARATH)%3B contains Interpro domain(s) IPR011989 Armadillo-like helicalch11+View
SL06G076040U-box domain-containing protein (AHRD V1 **-- D7KBV1_ARALY)%3B contains Interpro domain(s) IPR011989 Armadillo-like helicalch06-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G03770name=GSVIVG01024985001;chr6-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G11340No description available.1+View


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Gene id
Species
Description
Chromosome
Strand