Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT2G23170
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G37390 | Auxin-responsive GH3 family protein BRU6; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT1G59500.1); Has 1707 Blast hits to 1543 proteins in 239 species: Archae - 1; Bacteria - 597; Metazoa - 55; Fungi - 2; Plants - 674; Viruses - 0; Other Eukaryotes - 378 (source: NCBI BLink). Encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. May function as a negative component in auxin signaling by regulating auxin activity. | 4 | + | View |
Orthologs (inter-species colinear regions)
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00006G00720 | No description available. | supercontig_6 | - | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA04G33680 | CC_gene:GH3.5,CC_gene:GH3.4,CC_gene:GH3.6,CC_gene:GH3.3,CC_gene:GH3.2,CC_gene:GH3.1,CC_gene:GH3.8,CC_functional_completeness:complete,PRODUCT:Probable indole-3-acetic acid-amido synthetase GH3.8,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr4 | + | View |
| MA05G01590 | CC_gene:GH3.4,CC_gene:GH3.5,CC_gene:GH3.6,CC_gene:GH3.3,CC_gene:GH3.2,CC_gene:GH3.1,CC_gene:GH3.8,CC_functional_completeness:complete,PRODUCT:Probable indole-3-acetic acid-amido synthetase GH3.8,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr5 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT01G29830 | No description available. | Chr01 | + | View |
| PT09G09290 | No description available. | Chr09 | + | View |
| PT07G05030 | No description available. | Chr07 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL02G064810 | Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **-- B6U4E2_MAIZE)%3B contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter | ch02 | - | View |
| SL02G092820 | Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **** B6U4E2_MAIZE)%3B contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter | ch02 | - | View |
| SL01G107390 | Auxin-responsive GH3 product (AHRD V1 ***- Q05680_SOYBN)%3B contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter | ch01 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV07G00620 | name=GSVIVG01000176001; | chr7 | - | View |
| VV03G10340 | name=GSVIVG01037892001; | chr3 | + | View |