Anchorpoints
- Gene id
- AT2G20580
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G28470 | 26S proteasome regulatory subunit S2 1B (RPN1B); FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit (InterPro:IPR016643), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1A (TAIR:AT2G20580.1); Has 1017 Blast hits to 967 proteins in 297 species: Archae - 0; Bacteria - 10; Metazoa - 372; Fungi - 296; Plants - 141; Viruses - 0; Other Eukaryotes - 198 (source: NCBI BLink). 26S proteasome regulatory subunit S2 1B encoding the RPN subunits of the 26S proteasome | 4 | - | View |
Orthologs (inter-species colinear regions)
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT07G13720 | No description available. | Chr07 | + | View |
PT17G01480 | No description available. | Chr17 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL10G008170 | 26S proteasome regulatory subunit (AHRD V1 ***- C6HL17_AJECH) | ch10 | + | View |
SL07G053650 | 26S proteasome regulatory subunit (AHRD V1 ***- A8J3A4_CHLRE)%3B contains Interpro domain(s) IPR016643 26S proteasome regulatory complex%2C non-ATPase subcomplex%2C Rpn1 subunit | ch07 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV12G02010 | name=GSVIVG01020602001; | chr12 | + | View |