Anchorpoints

Gene id
AT2G20580
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G2847026S proteasome regulatory subunit S2 1B (RPN1B); FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit (InterPro:IPR016643), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1A (TAIR:AT2G20580.1); Has 1017 Blast hits to 967 proteins in 297 species: Archae - 0; Bacteria - 10; Metazoa - 372; Fungi - 296; Plants - 141; Viruses - 0; Other Eukaryotes - 198 (source: NCBI BLink). 26S proteasome regulatory subunit S2 1B encoding the RPN subunits of the 26S proteasome4-View


Orthologs (inter-species colinear regions)

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G13720No description available.Chr07+View
PT17G01480No description available.Chr17-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G00817026S proteasome regulatory subunit (AHRD V1 ***- C6HL17_AJECH)ch10+View
SL07G05365026S proteasome regulatory subunit (AHRD V1 ***- A8J3A4_CHLRE)%3B contains Interpro domain(s) IPR016643 26S proteasome regulatory complex%2C non-ATPase subcomplex%2C Rpn1 subunitch07+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV12G02010name=GSVIVG01020602001;chr12+View


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Gene id
Species
Description
Chromosome
Strand