Anchorpoints

Gene id
AT2G16780
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G35050MULTICOPY SUPPRESSOR OF IRA1 3 (MSI3); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G16780.1); Has 37885 Blast hits to 23592 proteins in 711 species: Archae - 24; Bacteria - 3738; Metazoa - 15273; Fungi - 8747; Plants - 5038; Viruses - 0; Other Eukaryotes - 5065 (source: NCBI BLink). Transducin family protein / WD-40 repeat family protein Encodes a WD-40 repeat protein similar to yeast MSI1. The predicted protein has a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase4-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00037G01290No description available.supercontig_37+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS09G36900WD domain, G-beta repeat domain containing protein, expressed9+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G13510No description available.Chr09-View
PT04G17530No description available.Chr04-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G111590Histone-binding protein RBBP7 (AHRD V1 **-* B5X3G4_SALSA)%3B contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat%2C regionch01-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G04710name=GSVIVG01024023001;chr3-View


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Gene id
Species
Description
Chromosome
Strand