Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT2G16720
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G38620 | myb domain protein 4 (MYB4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 32 (TAIR:AT4G34990.1); Has 9208 Blast hits to 8453 proteins in 515 species: Archae - 0; Bacteria - 0; Metazoa - 855; Fungi - 510; Plants - 6018; Viruses - 3; Other Eukaryotes - 1822 (source: NCBI BLink). myb domain protein 4 Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2. | 4 | + | View |
| AT4G34990 | Member of the R2R3 factor gene family. myb domain protein 32 (MYB32); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 7 (TAIR:AT2G16720.1); Has 9023 Blast hits to 8385 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 680; Fungi - 473; Plants - 6077; Viruses - 3; Other Eukaryotes - 1790 (source: NCBI BLink). myb domain protein 32 | 4 | - | View |
Orthologs (inter-species colinear regions)
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00037G01430 | No description available. | supercontig_37 | + | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA01G07830 | CC_gene:MYB3,CC_gene:MYB1,CC_gene:MYB6,CC_gene:MYB330,CC_gene:MYB32,CC_gene:MYB4,CC_gene:MYB308,CC_functional_completeness:complete,PRODUCT:Myb-related protein Zm38,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr1 | + | View |
| MA01G19340 | CC_gene:MYB32,CC_gene:MYB4,CC_gene:MYB6,CC_gene:MYB39,CC_gene:MYB86,CC_gene:MYB315,CC_gene:PP2,CC_gene:ODO1,CC_functional_completeness:complete,PRODUCT:Protein ODORANT1,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr1 | + | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS09G36730 | MYB family transcription factor, putative, expressed | 9 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT04G17440 | No description available. | Chr04 | - | View |
| PT09G13400 | No description available. | Chr09 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL01G111500 | MYB transcription factor (AHRD V1 **** B9H191_POPTR)%3B contains Interpro domain(s) IPR015495 Myb transcription factor | ch01 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV03G04830 | name=GSVIVG01024036001; | chr3 | - | View |