Anchorpoints

Gene id
AT1G78090
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G22210Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-6-phosphate phosphatase (TAIR:AT1G78090.1); Has 2333 Blast hits to 2328 proteins in 832 species: Archae - 41; Bacteria - 1319; Metazoa - 218; Fungi - 151; Plants - 473; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink).1+View
AT1G35910Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-6-phosphate phosphatase (TAIR:AT1G78090.1); Has 2331 Blast hits to 2325 proteins in 843 species: Archae - 41; Bacteria - 1347; Metazoa - 218; Fungi - 145; Plants - 454; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). Haloacid dehalogenase-like hydrolase (HAD) superfamily protein1-View
AT4G39770Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G22190.1); Has 2411 Blast hits to 2406 proteins in 857 species: Archae - 41; Bacteria - 1356; Metazoa - 219; Fungi - 156; Plants - 489; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). Haloacid dehalogenase-like hydrolase (HAD) superfamily protein4-View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G58960No description available.Bd3-View
BD3G35590No description available.Bd3+View
BD1G60950No description available.Bd1-View
BD1G45480No description available.Bd1+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00036G01120No description available.supercontig_36-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA10G25010CC_gene:otsB,CC_gene:Rv2006,CC_functional_completeness:complete,PRODUCT:uncharacterized glycosyl hydrolase Rv2006/MT2062%2C putative%2C expressed,GO:0008152,GO:0005992,GO:0003824,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.1.3.12chr10+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G43160uncharacterized glycosyl hydrolase Rv2006%2FMT2062, putative, expressed Probable trehalose-phosphate phosphatase 37+View
OS03G26910uncharacterized glycosyl hydrolase Rv2006%2FMT2062, putative, expressed Probable trehalose-phosphate phosphatase 93+View
OS02G51680Probable trehalose-phosphate phosphatase 4 uncharacterized glycosyl hydrolase Rv2006%2FMT2062, putative, expressed2+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G25580No description available.Chr03+View
OSINDICA_07G35200No description available.Chr07+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G09450No description available.Chr02+View
PT05G16670No description available.Chr05-View
PT07G09090No description available.Chr07+View
PT05G07720No description available.Chr05-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G033800No description available.chr_1-View
SB04G027650No description available.chr_4-View
SB02G039790No description available.chr_2+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI001G33640No description available.scaffold_1+View
SI002G40570No description available.scaffold_2+View
SI009G39410No description available.scaffold_9-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G054930Trehalose-6-phosphate phosphatase-like protein (AHRD V1 ***- Q9LX18_ARATH)%3B contains Interpro domain(s) IPR003337 Trehalose-phosphatasech04-View
SL04G072920Trehalose-6-phosphate phosphatase (AHRD V1 ***- D7KV74_ARALY)%3B contains Interpro domain(s) IPR003337 Trehalose-phosphatasech04+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G03360name=GSVIVG01009010001;chr18+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G40760No description available.5+View
ZM04G27640No description available.4-View


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