PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: AT1G76500
Organism: Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
AT1G20900	ESCAROLA (ESC); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G76500.1); Has 2335 Blast hits to 2120 proteins in 205 species: Archae - 0; Bacteria - 577; Metazoa - 531; Fungi - 95; Plants - 869; Viruses - 15; Other Eukaryotes - 248 (source: NCBI BLink). Encodes an AT hook domain containing protein that acts redundantly with SOB3 to modulate hypocotyl growth inhibition in response to light. Predicted AT-hook DNA-binding family protein	1	+	View

Orthologs (inter-species colinear regions)

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00026G00050	No description available.	supercontig_26	-	View

Musa acuminata

Gene id	Description	Chromosome	Strand	Multiplicon
MA09G12580	CC_gene:SUVH8,CC_gene:SUVH7,CC_gene:ESC,CC_functional_completeness:complete,PRODUCT:Putative uncharacterized protein Sb10g012980,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number	chr9	-	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS06G41860	DNA binding protein, putative, expressed	6	+	View

Oryza sativa ssp. indica

Gene id	Description	Chromosome	Strand	Multiplicon
OSINDICA_06G37710	No description available.	Chr06	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT04G20860	No description available.	Chr04	+	View
PT05G25720	No description available.	Chr05	+	View
PT02G00380	No description available.	Chr02	-	View

Setaria italica

Gene id	Description	Chromosome	Strand	Multiplicon
SI004G21640	No description available.	scaffold_4	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL04G082810	AT-hook DNA-binding protein (Fragment) (AHRD V1 *- A1DR81_CATRO)%3B contains Interpro domain(s) IPR014476 Predicted AT-hook DNA-binding	ch04	+	View
SL06G060500	AT-hook DNA-binding protein (Fragment) (AHRD V1 *- A1DR81_CATRO)%3B contains Interpro domain(s) IPR014476 Predicted AT-hook DNA-binding	ch06	-	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV18G12870	name=GSVIVG01013438001;	chr18	-	View