Anchorpoints
- Gene id
- AT1G75950
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G20140 | SKP1-like 4 (SK4); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 3 (TAIR:AT2G25700.1); Has 1439 Blast hits to 1435 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 180; Plants - 528; Viruses - 11; Other Eukaryotes - 160 (source: NCBI BLink). SKP1-like 4 | 1 | + | View |
Orthologs (inter-species colinear regions)
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00020G00920 | No description available. | supercontig_20 | + | View |
CP00026G02900 | No description available. | supercontig_26 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA08G13480 | CC_gene:ASK9,CC_gene:ASK10,CC_gene:ASK12,CC_gene:ASK11,CC_gene:ASK3,CC_gene:ASK4,CC_gene:SKP1B,CC_gene:SKP1A,CC_functional_completeness:complete,PRODUCT:SKP1-like protein 1A,GO:0006511,GO:0005515,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr8 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G24310 | No description available. | Chr05 | + | View |
PT02G01870 | No description available. | Chr02 | - | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB02G031280 | No description available. | chr_2 | - | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI002G29700 | No description available. | scaffold_2 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G111640 | Skp1 (AHRD V1 ***- Q49HP3_CAPAN)%3B contains Interpro domain(s) IPR016897 E3 ubiquitin ligase%2C SCF complex%2C Skp subunit | ch01 | + | View |