Anchorpoints

Gene id
AT1G75370
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G34580Encodes COW1 (can of worms1), a phosphatidylinositol transfer protein essential for root hair tip growth. The N-terminus of the COW1 protein is 32% identical to an essential phosphatidylinositol transfer protein (PITP), the yeast Sec14 protein (sec14p) while the C-terminus is 34.5% identical to a late nodulin of Lotus japonicus, Nlj16. Expression of COW1 complements the growth defect associated with Sec14p dysfunction in yeast. GFP fused to the COW1 protein specifically accumulates at the site of root hair outgrowth. Sec14p-like phosphatidylinositol transfer family protein CAN OF WORMS1 (COW1); FUNCTIONS IN: transporter activity, phosphatidylinositol transporter activity; INVOLVED IN: root epidermal cell differentiation, transport, root hair cell tip growth, cell tip growth; LOCATED IN: intracellular; EXPRESSED IN: 9 plant structures; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G16380.1); Has 3006 Blast hits to 2988 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 982; Fungi - 671; Plants - 907; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink).4+View
AT1G19650Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: phosphatidylinositol transporter activity, transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G75370.1); Has 2627 Blast hits to 2615 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 801; Fungi - 541; Plants - 877; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). Sec14p-like phosphatidylinositol transfer family protein1-View
AT4G39170Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: phosphatidylinositol transporter activity, transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G21520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Sec14p-like phosphatidylinositol transfer family protein4+View
AT2G18180Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14-like 12 (TAIR:AT4G36490.1); Has 2664 Blast hits to 2639 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 761; Fungi - 594; Plants - 895; Viruses - 1; Other Eukaryotes - 413 (source: NCBI BLink). Sec14p-like phosphatidylinositol transfer family protein2-View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G03020No description available.Bd3+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA10G21140CC_gene:YKL091C,CC_gene:SEC14,CC_gene:sec14,CC_functional_completeness:modules,PRODUCT:Putative Sec14 cytosolic factor,GO:0006810,GO:0005622,GO:0005215,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G04020No description available.2+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G03360No description available.Chr02+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G11940No description available.Chr09+View
PT02G03260No description available.Chr02+View
PT04G15760No description available.Chr04+View
PT05G23050No description available.Chr05-View
PT05G11970No description available.Chr05-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB04G002750No description available.chr_4+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G053900SEC14-like protein (AHRD V1 **-- Q9T027_ARATH)%3B contains Interpro domain(s) IPR001251 Cellular retinaldehyde-binding/triple function%2C C-terminalch10-View
SL04G080690SEC14-like protein (AHRD V1 **-- Q9T027_ARATH)%3B contains Interpro domain(s) IPR001251 Cellular retinaldehyde-binding/triple function%2C C-terminalch04-View
SL01G109860Phosphatidylinositol/phosphatidylcholine transfer protein-like (AHRD V1 **-* Q9LRX7_ARATH)%3B contains Interpro domain(s) IPR001251 Cellular retinaldehyde-binding/triple function%2C C-terminalch01+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G09350name=GSVIVG01009759001;chr18-View


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Description
Chromosome
Strand