Anchorpoints
- Gene id
- AT1G69120
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G03710 | This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity. K-box region and MADS-box transcription factor family protein SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7361 Blast hits to 7360 proteins in 917 species: Archae - 0; Bacteria - 4; Metazoa - 643; Fungi - 310; Plants - 6307; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). | 2 | + | View |
AT1G26310 | Floral homeotic gene encoding a MADS domain protein homologous to AP1. Enhances the flower to shoot transformation in ap1 mutants. K-box region and MADS-box transcription factor family protein CAULIFLOWER (CAL); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, floral meristem determinacy; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 8035 Blast hits to 8024 proteins in 979 species: Archae - 8; Bacteria - 30; Metazoa - 829; Fungi - 313; Plants - 6634; Viruses - 0; Other Eukaryotes - 221 (source: NCBI BLink). | 1 | - | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD1G21980 | No description available. | Bd1 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00001G01580 | No description available. | supercontig_1 | + | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA07G00460 | CC_gene:AGL8,CC_gene:SCM1,CC_gene:MADS15,CC_gene:MADS18,CC_gene:MADS14,CC_functional_completeness:complete,PRODUCT:MADS-box transcription factor 14,GO:0043565,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr7 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT10G15410 | No description available. | Chr10 | - | View |
PT08G09840 | No description available. | Chr08 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL02G065730 | MADS box transcription factor (AHRD V1 ***- Q689E7_GENTR)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-box | ch02 | - | View |
SL03G114830 | MADS box transcription factor (AHRD V1 ***- Q9SBQ1_PETHY)%3B contains Interpro domain(s) IPR002487 Transcription factor%2C K-box | ch03 | - | View |
SL05G056620 | Myocyte-specific enhancer factor 2D (AHRD V1 *-*- MEF2D_HUMAN)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-box IPR002487 Transcription factor%2C K-box | ch05 | - | View |
SL04G005320 | MADS-box transcription factor (AHRD V1 **** Q8S4L4_SOLLC)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-box | ch04 | - | View |
SL06G069430 | MADS box transcription factor (AHRD V1 ***- Q9SBQ1_PETHY)%3B contains Interpro domain(s) IPR002487 Transcription factor%2C K-box | ch06 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV01G10760 | name=GSVIVG01012250001; | chr1 | - | View |
VV14G16100 | name=GSVIVG01036549001; | chr14 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM01G53030 | m24 protein | 1 | - | View |