Anchorpoints

Gene id
AT1G53090
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G15354Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA3 (and SPA4) predominantly regulates elongation growth in adult plants. SPA1-related 3 (SPA3); FUNCTIONS IN: protein binding, signal transducer activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Serine/threonine-protein kinase domain (InterPro:IPR002290), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 4 (TAIR:AT1G53090.2); Has 21839 Blast hits to 15304 proteins in 547 species: Archae - 20; Bacteria - 4030; Metazoa - 7396; Fungi - 4798; Plants - 2703; Viruses - 2; Other Eukaryotes - 2890 (source: NCBI BLink). SPA1-related 33-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00080G00650No description available.supercontig_80+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT11G11950No description available.Chr11+View
PT01G39960No description available.Chr01-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G013840WD-40 repeat protein (AHRD V1 *--- B7KCU4_CYAP7)%3B contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat%2C regionch12+View
SL07G063120WD-40 repeat protein (AHRD V1 *--- B7KCU4_CYAP7)%3B contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat%2C regionch07-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV19G02880name=GSVIVG01014332001;chr19-View


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Gene id
Species
Description
Chromosome
Strand