Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT1G26930
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G02870 | Galactose oxidase/kelch repeat superfamily protein Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G14330.1); Has 7278 Blast hits to 4161 proteins in 259 species: Archae - 4; Bacteria - 397; Metazoa - 5328; Fungi - 9; Plants - 1063; Viruses - 147; Other Eukaryotes - 330 (source: NCBI BLink). | 2 | + | View |
| AT1G14330 | Galactose oxidase/kelch repeat superfamily protein Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G02870.3); Has 8067 Blast hits to 4582 proteins in 289 species: Archae - 6; Bacteria - 418; Metazoa - 6039; Fungi - 16; Plants - 1102; Viruses - 148; Other Eukaryotes - 338 (source: NCBI BLink). | 1 | - | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD1G73150 | No description available. | Bd1 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00183G00360 | No description available. | supercontig_183 | + | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS03G07530 | OsFBK12 - F-box domain and kelch repeat containing protein, expressed | 3 | + | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_03G06560 | No description available. | Chr03 | + | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI009G53950 | No description available. | scaffold_9 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL05G007220 | Kelch repeat-containing F-box family protein (AHRD V1 *-*- D7LQA8_ARALY)%3B contains Interpro domain(s) IPR015915 Kelch-type beta propeller | ch05 | + | View |
| SL04G005670 | Kelch-like protein 17 (AHRD V1 *-*- KLH17_RAT)%3B contains Interpro domain(s) IPR015915 Kelch-type beta propeller | ch04 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV17G03940 | name=GSVIVG01008033001; | chr17 | + | View |
| VV01G12350 | name=GSVIVG01020023001; | chr1 | + | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM09G27720 | LOC100283956 | 9 | - | View |
| ZM01G05110 | kelch motif family protein | 1 | + | View |