Expansion plot
Gene family finder
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Synteny plot
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Functional clusters
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BLAST
WorkbenchAnchorpoints
- Gene id
- AT1G25490
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G25800 | protein phosphatase 2A subunit A2 protein phosphatase 2A subunit A2 (PP2AA2); FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: response to cadmium ion, regulation of phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A subunit A3 (TAIR:AT1G13320.3); Has 2834 Blast hits to 1736 proteins in 250 species: Archae - 15; Bacteria - 74; Metazoa - 1458; Fungi - 417; Plants - 306; Viruses - 0; Other Eukaryotes - 564 (source: NCBI BLink). one of three genes encoding the protein phosphatase 2A regulatory subunit | 3 | - | View |
Orthologs (inter-species colinear regions)
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00001G01920 | No description available. | supercontig_1 | + | View |
| CP00013G00070 | No description available. | supercontig_13 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT08G11850 | No description available. | Chr08 | - | View |
| PT10G12750 | No description available. | Chr10 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL06G069180 | Phosphatase 2A regulatory A subunit (AHRD V1 **** Q9S7C5_ORYSA)%3B contains Interpro domain(s) IPR011989 Armadillo-like helical | ch06 | + | View |
| SL05G009600 | Phosphatase 2A regulatory A subunit (AHRD V1 **** Q9S7C5_ORYSA)%3B contains Interpro domain(s) IPR011989 Armadillo-like helical | ch05 | + | View |
| SL04G007100 | Phosphatase 2A regulatory A subunit (AHRD V1 **** Q9S7C5_ORYSA)%3B contains Interpro domain(s) IPR011989 Armadillo-like helical | ch04 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV17G05840 | name=GSVIVG01008268001; | chr17 | + | View |
| VV01G08000 | name=GSVIVG01011923001; | chr1 | - | View |