Anchorpoints

Gene id
AT1G24140
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G70170matrix metalloproteinase matrix metalloproteinase (MMP); FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, cysteine switch, zinc binding site (InterPro:IPR021158), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: Matrixin family protein (TAIR:AT1G24140.1); Has 2679 Blast hits to 2485 proteins in 220 species: Archae - 2; Bacteria - 128; Metazoa - 2206; Fungi - 4; Plants - 185; Viruses - 44; Other Eukaryotes - 110 (source: NCBI BLink). mutant has Late flowering; Early senescence; Matrix Metalloproteinase1+View
AT1G59970Matrixin family protein Matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, cysteine switch, zinc binding site (InterPro:IPR021158), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: Matrixin family protein (TAIR:AT1G24140.1); Has 2665 Blast hits to 2469 proteins in 210 species: Archae - 2; Bacteria - 119; Metazoa - 2216; Fungi - 6; Plants - 186; Viruses - 42; Other Eukaryotes - 94 (source: NCBI BLink).1+View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G59680No description available.Bd3+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00005G03280No description available.supercontig_5+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G48970No description available.Chr02-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB04G028370No description available.chr_4+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI001G32800No description available.scaffold_1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G006360Matrix metalloproteinase (AHRD V1 **-- B7TVN4_PINTA)%3B contains Interpro domain(s) IPR001818 Peptidase M10A and M12B%2C matrixin and adamalysinch05+View
SL04G005040Matrix metalloproteinase (AHRD V1 **-- B7TVN4_PINTA)%3B contains Interpro domain(s) IPR001818 Peptidase M10A and M12B%2C matrixin and adamalysinch04+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G13300name=GSVIVG01020151001;chr1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G39870metalloendoproteinase 1 (LOC100285384), mRNA5-View


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Gene id
Species
Description
Chromosome
Strand