Anchorpoints

Gene id
AT1G23380
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G70510KNOTTED-like from Arabidopsis thaliana 2 (KNAT2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to ethylene stimulus, cytokinin mediated signaling pathway, specification of carpel identity; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 6 (TAIR:AT1G23380.1); Has 6101 Blast hits to 6101 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 1779; Fungi - 271; Plants - 3894; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems. KNOTTED-like from Arabidopsis thaliana 21+View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00069G00790No description available.supercontig_69+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G18870No description available.Chr08-View
PT10G04350No description available.Chr10+View
PT15G07910No description available.Chr15+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G005090Knotted-1-like homeobox protein H1 (AHRD V1 ***- Q8GUS6_TOBAC)%3B contains Interpro domain(s) IPR005541 KNOX2ch05-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G01490name=GSVIVG01007715001;chr17+View
VV01G11620name=GSVIVG01013790001;chr1-View


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Gene id
Species
Description
Chromosome
Strand