Anchorpoints

Gene id
AT1G23080
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G70940PIN-FORMED 3 (PIN3); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity; INVOLVED IN: in 8 processes; LOCATED IN: lateral plasma membrane, plasma membrane, vesicle membrane, cell surface; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G23080.1); Has 1983 Blast hits to 1757 proteins in 550 species: Archae - 37; Bacteria - 1198; Metazoa - 14; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). Auxin efflux carrier family protein A regulator of auxin efflux and involved in differential growth. PIN3 is expressed in gravity-sensing tissues, with PIN3 protein accumulating predominantly at the lateral cell surface. PIN3 localizes to the plasma membrane and to vesicles. In roots, PIN3 is expressed without pronounced polarity in tiers two and three of the columella cells, at the basal side of vascular cells, and to the lateral side of pericycle cells of the elongation zone. PIN3 overexpression inhibits root cell growth. Protein phosphorylation plays a role in regulating PIN3 trafficking to the plasma membrane.1+View


Orthologs (inter-species colinear regions)

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G12940No description available.Chr08-View
PT10G11280No description available.Chr10+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G008060Auxin efflux carrier (AHRD V1 **** D6RT10_SOLLC)%3B contains Interpro domain(s) IPR014024 Auxin efflux carrier%2C subgroupch05+View


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