Anchorpoints

Gene id
AT1G20340
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G76100One of two Arabidopsis plastocyanin genes. Expressed at 1/10th level of PETE2. Does not respond to increased copper levels and is thought to be the isoform that participates in electron transport under copper-limiting conditions. Mutation of this gene does not have obvious effect on photosynthesis. plastocyanin 1 plastocyanin 1 (PETE1); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Blue (type 1) copper protein (InterPro:IPR001235), Cupredoxin (InterPro:IPR008972), Plastocyanin (InterPro:IPR002387), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G20340.1); Has 1305 Blast hits to 1299 proteins in 244 species: Archae - 140; Bacteria - 448; Metazoa - 0; Fungi - 0; Plants - 204; Viruses - 5; Other Eukaryotes - 508 (source: NCBI BLink).1-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00026G02580No description available.supercontig_26+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G01600No description available.Chr02+View
PT05G24610No description available.Chr05-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G082010Plastocyanin (AHRD V1 ***- Q0W9E5_SOLCO)%3B contains Interpro domain(s) IPR000923 Blue (type 1) copper domain Plastocyanin, chloroplasticch04-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G01040name=GSVIVG01008733001;chr18+View


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Gene id
Species
Description
Chromosome
Strand