Anchorpoints

Gene id
AT1G20010
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G75780tubulin beta-1 chain beta tubulin gene downregulated by phytochrome A (phyA)-mediated far-red light high-irradiance and the phytochrome B (phyB)-mediated red light high-irradiance responses tubulin beta-1 chain (TUB1); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: response to light stimulus, unidimensional cell growth; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta-5 chain (TAIR:AT1G20010.1); Has 23671 Blast hits to 23575 proteins in 4891 species: Archae - 36; Bacteria - 42; Metazoa - 4470; Fungi - 14216; Plants - 1549; Viruses - 0; Other Eukaryotes - 3358 (source: NCBI BLink).1-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00026G00500No description available.supercontig_26-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G02180No description available.Chr02+View
PT05G23990No description available.Chr05-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G089310Tubulin beta-1 chain (AHRD V1 ***- D7KT68_ARALY)%3B contains Interpro domain(s) IPR002453 Beta tubulinch12-View
SL04G081490Tubulin beta-1 chain (AHRD V1 ***- D7KT68_ARALY)%3B contains Interpro domain(s) IPR002453 Beta tubulinch04-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G10640name=GSVIVG01009913001;chr18-View


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Gene id
Species
Description
Chromosome
Strand