PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: AT1G19450
Organism: Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
AT1G75220	Encodes a vacuolar glucose exporter that is induced in response to factors that activate vacuolar glucose pools like darkness, heat stress and wounding and repressed during conditions that trigger glucose accumulation in the vacuole like cold stress and external sugar supply. Major facilitator superfamily protein Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G19450.1); Has 32350 Blast hits to 31611 proteins in 2276 species: Archae - 620; Bacteria - 16081; Metazoa - 5271; Fungi - 6395; Plants - 2558; Viruses - 2; Other Eukaryotes - 1423 (source: NCBI BLink).	1	-	View
AT4G36670	Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G18480.1); Has 44203 Blast hits to 43606 proteins in 2595 species: Archae - 767; Bacteria - 24504; Metazoa - 5461; Fungi - 8681; Plants - 2771; Viruses - 2; Other Eukaryotes - 2017 (source: NCBI BLink). Major facilitator superfamily protein	4	-	View

Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id	Description	Chromosome	Strand	Multiplicon
BD1G71360	No description available.	Bd1	-	View

Musa acuminata

Gene id	Description	Chromosome	Strand	Multiplicon
MA07G26550	CC_gene:csbC,CC_gene:ywtG,CC_gene:PLT4,CC_gene:PLT2,CC_gene:PLT1,CC_gene:PLT3,CC_gene:PLT5,CC_gene:PLT6,CC_functional_completeness:complete,PRODUCT:Probable polyol transporter 6,GO:0055085,GO:0022891,GO:0016021,GO:0016020,GO:0006810,GO:0005215,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number	chr7	-	View
MA01G23550	CC_gene:ywtG,CC_gene:xylT,CC_gene:PLT4,CC_gene:PLT3,CC_gene:PLT6,CC_gene:PLT5,CC_gene:PLT2,CC_gene:PLT1,CC_functional_completeness:fragment,PRODUCT:Putative polyol transporter 1,GO:0055085,GO:0022891,GO:0016021,GO:0016020,GO:0006810,GO:0005215,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number	chr1	+	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS03G10090	transporter family protein, putative, expressed	3	+	View

Oryza sativa ssp. indica

Gene id	Description	Chromosome	Strand	Multiplicon
OSINDICA_03G08560	No description available.	Chr03	+	View

Sorghum bicolor

Gene id	Description	Chromosome	Strand	Multiplicon
SB09G028810	No description available.	chr_9	+	View
SB01G044010	No description available.	chr_1	-	View

Setaria italica

Gene id	Description	Chromosome	Strand	Multiplicon
SI009G52060	No description available.	scaffold_9	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL04G080460	Glucose transporter 8 (AHRD V1 ***- Q2KKJ3_SOLIN)%3B contains Interpro domain(s) IPR003663 Sugar/inositol transporter	ch04	-	View
SL02G062750	Glucose transporter 8 (AHRD V1 ***- Q2KKJ3_SOLIN)%3B contains Interpro domain(s) IPR003663 Sugar/inositol transporter	ch02	+	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV18G08980	name=GSVIVG01009719001;	chr18	-	View

Zea mays

Gene id	Description	Chromosome	Strand	Multiplicon
ZM09G26680	LOC100284344	9	-	View
ZM01G07380	sorbitol transporter	1	-	View