Anchorpoints

Gene id
AT1G17420
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G72520PLAT/LH2 domain-containing lipoxygenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: growth, jasmonic acid biosynthetic process, response to wounding, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: lipoxygenase 3 (TAIR:AT1G17420.1); Has 1471 Blast hits to 1433 proteins in 182 species: Archae - 0; Bacteria - 79; Metazoa - 528; Fungi - 49; Plants - 786; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). PLAT/LH2 domain-containing lipoxygenase family protein1+View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G72690No description available.Bd1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00025G01270No description available.supercontig_25-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G08220Probable lipoxygenase 6 lipoxygenase protein, putative, expressed3+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G07150No description available.Chr03+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G16770No description available.Chr01+View
PT03G06760No description available.Chr03+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G045240No description available.chr_1-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G53480No description available.scaffold_9-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G122340Lipoxygenase (AHRD V1 **** Q96574_SOLLC)%3B contains Interpro domain(s) IPR001246 Lipoxygenase%2C plantch03+View
SL12G011040Lipoxygenase (AHRD V1 ***- O24370_SOLTU)%3B contains Interpro domain(s) IPR001246 Lipoxygenase%2C plantch12-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV09G02280name=GSVIVG01016738001;chr9+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G05460lipoxygenase9;lipoxygenase91+View


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Gene id
Species
Description
Chromosome
Strand