Anchorpoints

Gene id
AT1G14685
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G01930BASIC PENTACYSTEINE1 (BPC1) is a regulator of the homeotic Arabidopsis thaliana gene SEEDSTICK (STK), which controls ovule identity. BPC1 induces conformational changes by cooperative binding to purine-rich elements present in the STK regulatory sequence. STK is upregulated in bpc1 mutant. basic pentacysteine1 basic pentacysteine1 (BPC1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, specific transcriptional repressor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine 2 (TAIR:AT1G14685.1); Has 220 Blast hits to 218 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00002G01130No description available.supercontig_2+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA06G11670CC_gene:hunk,CC_gene:CHDH,CC_gene:Scarf2,CC_gene:PDS5B,CC_gene:REM19,CC_gene:rpoC,CC_functional_completeness:complete,PRODUCT:GAGA-binding protein%2C putative%2C expressed,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr6+View
MA02G22240CC_gene:hunk-a,CC_gene:APC1,CC_gene:aor,CC_gene:PIM1,CC_gene:FGFR1,CC_functional_completeness:fragment,PRODUCT:GAGA-binding protein%2C putative%2C expressed,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr2+View
MA09G16160CC_functional_completeness:complete,PRODUCT:Putative Whole genome shotgun sequence of line PN40024%2C scaffold_11.assembly12x (Fragment),CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr9-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G14020No description available.Chr08-View
PT15G03280No description available.Chr15-View
PT10G10140No description available.Chr10+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G49140No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G008380GAGA-binding transcriptional activator (AHRD V1 ***- D7KCI3_ARALY)%3B contains Interpro domain(s) IPR010409 GAGA binding-likech04-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G05300name=GSVIVG01011589001;chr1-View


Download

Gene id
Species
Description
Chromosome
Strand