Anchorpoints

Gene id
AT1G14420
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G02720Pectate lyase family protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT1G14420.1); Has 1746 Blast hits to 1737 proteins in 278 species: Archae - 0; Bacteria - 753; Metazoa - 0; Fungi - 264; Plants - 699; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). Pectate lyase family protein2+View


Orthologs (inter-species colinear regions)

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G067450Pectate lyase family protein (AHRD V1 **** D7M6R5_ARALY)%3B contains Interpro domain(s) IPR002022 Pectate lyase/Amb allergench02-View
SL05G007080Pectate lyase family protein (AHRD V1 **** D7M6R5_ARALY)%3B contains Interpro domain(s) IPR002022 Pectate lyase/Amb allergench05+View
SL02G087670Pectate lyase family protein (AHRD V1 **** D7M6R5_ARALY)%3B contains Interpro domain(s) IPR002022 Pectate lyase/Amb allergench02+View
SL01G010740Pectate lyase family protein (AHRD V1 **** D7M6R5_ARALY)%3B contains Interpro domain(s) IPR002022 Pectate lyase/Amb allergench01-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G04110name=GSVIVG01008053001;chr17+View
VV14G01610name=GSVIVG01011348001;chr14+View
VV01G12660name=GSVIVG01020068001;chr1+View


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Gene id
Species
Description
Chromosome
Strand