Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT1G12750
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G63120 | AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein. RHOMBOID-like 2 (RBL2); CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 6 (TAIR:AT1G12750.3); Has 6856 Blast hits to 6855 proteins in 1947 species: Archae - 152; Bacteria - 4411; Metazoa - 521; Fungi - 179; Plants - 374; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink). RHOMBOID-like 2 | 1 | - | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD1G77450 | No description available. | Bd1 | - | View |
| BD4G35740 | No description available. | Bd4 | - | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA11G22300 | CC_gene:RHBDF1,CC_gene:Rhbdf1,CC_gene:rhbdf1,CC_functional_completeness:complete,PRODUCT:OsRhmbd16 - Putative Rhomboid homologue%2C expressed,GO:0016021,GO:0004252,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.4.21.105 | chr11 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS03G02530 | OsRhmbd7 - Putative Rhomboid homologue, expressed | 3 | + | View |
| OS04G48130 | OsRhmbd11 - Putative Rhomboid homologue, expressed | 4 | + | View |
| OS09G35730 | OsRhmbd16 - Putative Rhomboid homologue, expressed | 9 | - | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_09G28020 | No description available. | Chr09 | - | View |
| OSINDICA_04G40280 | No description available. | Chr04 | + | View |
| OSINDICA_03G01550 | No description available. | Chr03 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT01G10870 | No description available. | Chr01 | + | View |
| PT03G12290 | No description available. | Chr03 | - | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB06G025770 | No description available. | chr_6 | + | View |
| SB02G030450 | No description available. | chr_2 | - | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI002G28830 | No description available. | scaffold_2 | - | View |
| SI007G20930 | No description available. | scaffold_7 | + | View |
| SI009G58710 | No description available. | scaffold_9 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL03G026080 | Rhomboid family protein (AHRD V1 **-- D7M0H4_ARALY)%3B contains Interpro domain(s) IPR002610 Peptidase S54%2C rhomboid | ch03 | + | View |
| SL08G080500 | Rhomboid family protein (AHRD V1 ***- D7M0H4_ARALY)%3B contains Interpro domain(s) IPR002610 Peptidase S54%2C rhomboid | ch08 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV02G07010 | name=GSVIVG01019824001; | chr2 | - | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM01G01040 | No description available. | 1 | + | View |