Anchorpoints

Gene id
AT1G11910
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G62290Saposin-like aspartyl protease family protein Saposin-like aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis, lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, seedling growth, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: aspartic proteinase A1 (TAIR:AT1G11910.1); Has 7282 Blast hits to 5100 proteins in 420 species: Archae - 0; Bacteria - 6; Metazoa - 4064; Fungi - 1685; Plants - 579; Viruses - 0; Other Eukaryotes - 948 (source: NCBI BLink).1-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00152G00340No description available.supercontig_152-View
CP00087G00940No description available.supercontig_87-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT11G00760No description available.Chr11-View
PT04G00760No description available.Chr04+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G080880Aspartic proteinase (AHRD V1 **-* Q8L6A8_THECC)%3B contains Interpro domain(s) IPR001461 Peptidase A1ch02-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV10G00710name=GSVIVG01012684001;chr10+View
VV19G10770name=GSVIVG01037685001;chr19-View


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Gene id
Species
Description
Chromosome
Strand