PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: AT1G11820
Organism: Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
AT4G26830	O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G55180.1); Has 2849 Blast hits to 2768 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 2823; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). O-Glycosyl hydrolases family 17 protein	4	-	View

Orthologs (inter-species colinear regions)

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00152G00260	No description available.	supercontig_152	-	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS07G32600	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	7	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT04G01050	No description available.	Chr04	-	View
PT11G00610	No description available.	Chr11	+	View

Setaria italica

Gene id	Description	Chromosome	Strand	Multiplicon
SI002G33590	No description available.	scaffold_2	+	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL02G080660	Glucan endo-1 3-beta-glucosidase 3 (AHRD V1 ***- B6UBU1_MAIZE)%3B contains Interpro domain(s) IPR012946 X8	ch02	+	View

Zea mays

Gene id	Description	Chromosome	Strand	Multiplicon
ZM07G22730	glucan endo-1,3-beta-glucosidase 3	7	+	View