Anchorpoints

Gene id
AT1G10050
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G58370glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein Encodes a protein with xylanase activity. RXF12; FUNCTIONS IN: endo-1,4-beta-xylanase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein (TAIR:AT1G10050.1); Has 2572 Blast hits to 2336 proteins in 449 species: Archae - 10; Bacteria - 1384; Metazoa - 31; Fungi - 355; Plants - 353; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink).1+View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00160G00190No description available.supercontig_160+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G11310No description available.Chr02+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G077190Endo-1 4-beta-xylanase (AHRD V1 *-** B6SW51_MAIZE)%3B contains Interpro domain(s) IPR013781 Glycoside hydrolase%2C subgroup%2C catalytic corech04+View
SL12G088210Endo-1 4-beta-xylanase (AHRD V1 ***- B6SW51_MAIZE)%3B contains Interpro domain(s) IPR013781 Glycoside hydrolase%2C subgroup%2C catalytic corech12+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G05360name=GSVIVG01009272001;chr18+View


Download

Gene id
Species
Description
Chromosome
Strand